Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00179

Metabolite ID
P00179
Deionized mass
189.9832 Da
Average m/z
190.9915
Average RT
3.0792
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.199e-12
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)3.347e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.486e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.971e-12
Glyma.16G106200 hypothetical protein NA 2Chr16:21463300–21469532 (+)4.626e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 2Chr16:21495147–21497932 (+)1.91e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.76e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.44e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.936e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.694e-15
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)9.607e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)9.607e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)9.607e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)4.468e-15
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)4.468e-15
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)3.397e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.154e-17
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.154e-17
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.769e-13
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)2.753e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.99e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.99e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.05e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)7.684e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.111e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.111e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)8.013e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)5.225e-12
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)1.275e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.325e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.661e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.056e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.293e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.165e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.155e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.971e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)6.818e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.899e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)2.007e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.199e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.34e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.078e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.889e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.889e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.753e-14