SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G052700

Description hypothetical protein

Gene interval Chr09:4617652–4626364 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G31120:KUP10:K+ uptake permease 10

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1463Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0021.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1463 matching features · page 136 of 147

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P49373 Reissantin A 625.2604 12.519e-13
P49409 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0974 14.036e-14
P49459 Bigarcinenone A 942.4126 13.654e-12
P49511 FO 2546F 587.3618 14.594e-11
P49559 9-Deacetylfumigaclavine C 324.2194 11.068e-11
P49563 Dabigatran 471.2041 14.239e-11
P49571 Olopatadine n-oxide 353.1566 11.083e-14
P49654 Bucolome 266.1611 12.251e-11
P49698 MG(20:4(5Z,8Z,11Z,14Z)-OH(16R)/0:0/0:0) 394.2729 12.882e-11
P49711 Butanedioic acid, octenyl- 228.1359 18.522e-15