Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49511

Metabolite ID
P49511
Deionized mass
587.3618 Da
Average m/z
588.3683
Average RT
26.1606
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.532e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)2.399e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.399e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.312e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.532e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.72e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)5.496e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.285e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.285e-12
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)4.412e-11
Glyma.02G109000 hypothetical protein NA 1Chr02:10440415–10444977 (+)2.011e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)5.284e-11
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 1Chr04:38560905–38571145 (-)1.448e-11
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr04:39818871–39825716 (+)1.448e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.218e-14
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.883e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.943e-11
Glyma.06G204900 hypothetical protein AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein 1Chr06:19353866–19354929 (+)8.387e-11
Glyma.06G215200 hypothetical protein AT2G26710:BAS1:Cytochrome P450 superfamily protein 1Chr06:22278471–22284503 (+)7.567e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.829e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)7.829e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)9.87e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.594e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)8.525e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.732e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.29e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.11e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.697e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.938e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.326e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.175e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.175e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.175e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.175e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)4.914e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)2.746e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.746e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.97e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.97e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.97e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.97e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.712e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)9.627e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)9.187e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.835e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.399e-13
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.399e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.613e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.411e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)3.274e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.895e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.895e-11