SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G019800

Alias VAMP721D

Description vesicle-associated membrane protein 721d

Gene interval Chr09:1540660–1547761 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features252Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

252 matching features · page 11 of 26

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P21326 4-methyl-3-pentenoic acid 114.0670 16.453e-11
P21471 Illifunone C 252.1331 16.492e-12
P21765 No candidate annotation 1058.2670 14.979e-11
P21796 6-Carboxyuridine 288.0545 12.822e-12
P21846 No candidate annotation 1042.2614 14.273e-11
P21894 N-[4-[3-Chloro-4-(2-pyridinylmethoxy)anilino]-3-cyano-7-ethoxy-6-quinolinyl]-4-(dimethylamino)-2-butenamide 556.1973 15.022e-11
P21951 3-O-Isobutyrylkinamycin C 566.1508 16.601e-11
P22151 No candidate annotation 858.3587 14.663e-12
P22371 No candidate annotation 352.6573 13.21e-11
P22499 Rosmadial 344.1593 13.055e-11