Overview Annotation GWAS Evidence Associated genes

P00694

Metabolite ID
P00694
Deionized mass
307.0854 Da
Average m/z
308.0931
Average RT
3.6713
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
142
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

142 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 8Chr18:51471540–51498344 (+)1.497e-13
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)4.484e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.513e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.79e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)1.32e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.575e-13
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)6.068e-14
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)2.55e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)2.19e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)4.107e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.134e-15
Glyma.09G231100 hypothetical protein AT5G42970:COP8:Proteasome component (PCI) domain protein 2Chr09:45450922–45457330 (-)3.428e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)4.762e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.828e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.828e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.242e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.521e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)1.498e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)5.754e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)7.384e-12
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 2Chr20:35498179–35500565 (-)1.284e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)6.9e-11
Glyma.01G038800 hypothetical protein NA 1Chr01:4162465–4166783 (-)4.046e-11
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 1Chr01:4304713–4310259 (-)7.521e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.685e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.685e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.256e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.438e-15
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)4.435e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.455e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)9.413e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.762e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.898e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.25e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.706e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.706e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.095e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.707e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.707e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.707e-14
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)4.33e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.48e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.234e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.232e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.8e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.048e-15
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)9.952e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)5.756e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)8.491e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)1.436e-12
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)4.197e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.446e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.249e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)7.644e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.237e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)4.582e-12
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)1.26e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)4.107e-14
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.575e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.024e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)9.717e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.134e-15
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.133e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.134e-15
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.134e-15
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)8.317e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)7.081e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.132e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.4e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)5.388e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)1.695e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.034e-16
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)5.275e-15
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)5.275e-15
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.14e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.734e-11
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)6.722e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.728e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.874e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.874e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.874e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.874e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)3.773e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.259e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.052e-12
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)2.603e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.905e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.905e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.508e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.513e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.671e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.828e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.828e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.424e-13
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.725e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.248e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.079e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.521e-11
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)8.06e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)8.84e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.801e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.407e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.801e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.801e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.685e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.106e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.382e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)9.778e-14
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.597e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.724e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.602e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.133e-13
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)1.536e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)6.598e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.022e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.201e-14
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)9.937e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.937e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)7.57e-11
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)3.152e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.179e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.021e-11
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)3.504e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)9.304e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.575e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.599e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.599e-14
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)9.883e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)5.691e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.518e-14
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)5.754e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)6.068e-14
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)1.358e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)1.281e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.376e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.376e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.918e-11
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)4.207e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.147e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)4.24e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.027e-11
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)2.923e-11