SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G087700

Description hypothetical protein

Gene interval Chr07:8111751–8121053 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G24495:MSH7:MUTS homolog 7

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features396Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0025.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

396 matching features · page 39 of 40

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52044 No candidate annotation 428.2503 11.81e-11
P52079 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1493 11.638e-11
P52185 Reproterol 389.1693 11.645e-11
P52302 7-Oxononane-1,1,9-tricarbaldehyde 226.1203 11.29e-11
P52469 1-nonadecene-2,3R-dicarboxylic acid 354.2722 12.662e-11
P52735 Cypendazole 329.1478 12.855e-11
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 19.961e-14
P54130 Agrimol F 640.2493 16.919e-12
P54280 Brachycerine 546.2208 15.073e-12
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 12.712e-14