P52302
Metabolite ID
P52302
Deionized mass
226.1203 Da
Average m/z
227.1264
Average RT
28.5561
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
101
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
101 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 4 | Chr19:1134716–1143232 (+) | 2.104e-14 | |
| Glyma.18G196200 | hypothetical protein | AT3G09100:AT3G09100:mRNA capping enzyme family protein | 3 | Chr18:47102746–47129707 (+) | 8.167e-13 | |
| Glyma.01G126800 | hypothetical protein | NA | 2 | Chr01:43602195–43612710 (+) | 6.282e-11 | |
| Glyma.05G182500 | hypothetical protein | AT5G65210:TGA1:bZIP transcription factor family protein | 2 | Chr05:37029299–37037313 (+) | 2.237e-11 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 4.203e-11 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 2 | Chr09:49863377–49871270 (+) | 7.519e-15 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.154e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.154e-13 | |
| Glyma.19G009000 | hypothetical protein | AT5G14780:FDH:formate dehydrogenase | 2 | Chr19:860974–865476 (+) | 5.748e-13 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 1.125e-15 | |
| Glyma.19G011900 | hypothetical protein | AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… | 2 | Chr19:1148510–1149495 (+) | 5.682e-13 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 2 | Chr19:1155711–1161298 (-) | 2.345e-18 | |
| Glyma.19G012300 | hypothetical protein | NA | 2 | Chr19:1165111–1173031 (-) | 2.345e-18 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 2.03e-12 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 1.01e-11 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 2.066e-11 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 2.066e-11 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 2.066e-11 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 2.066e-11 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 2.066e-11 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 2.066e-11 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 2.066e-11 | |
| Glyma.01G126900 | hypothetical protein | NA | 1 | Chr01:43632082–43635399 (+) | 6.282e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 2.769e-13 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 2.769e-13 | |
| Glyma.02G109200 | hypothetical protein | AT1G14180:AT1G14180:RING/U-box superfamily protein | 1 | Chr02:10483830–10487258 (-) | 6.809e-11 | |
| Glyma.02G109400 | hypothetical protein | NA | 1 | Chr02:10495046–10497626 (-) | 3.475e-12 | |
| Glyma.02G109900 | hypothetical protein | AT2G03150:emb1579:ATP/GTP-binding protein family | 1 | Chr02:10547851–10557930 (+) | 3.475e-12 | |
| Glyma.02G113000 | hypothetical protein | AT1G69370:CM3:chorismate mutase 3 | 1 | Chr02:10939096–10941983 (-) | 3.985e-14 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 1.7e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 5.269e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 4.639e-13 | |
| Glyma.03G031700 | hypothetical protein | AT1G79600:AT1G79600:Protein kinase superfamily protein | 1 | Chr03:3567906–3572939 (-) | 9.583e-11 | |
| Glyma.03G034200 | hypothetical protein | NA | 1 | Chr03:3989072–3993561 (+) | 1.989e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.961e-11 | |
| Glyma.04G158400 | hypothetical protein | AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein | 1 | Chr04:38560905–38571145 (-) | 9.446e-11 | |
| Glyma.04G160700 | hypothetical protein | AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein | 1 | Chr04:39818871–39825716 (+) | 9.446e-11 | |
| Glyma.05G182900 | hypothetical protein | NA | 1 | Chr05:37056753–37057349 (-) | 2.237e-11 | |
| Glyma.05G183100 | hypothetical protein | AT5G64940:ATH13:ABC2 homolog 13 | 1 | Chr05:37059525–37070146 (-) | 2.237e-11 | |
| Glyma.05G191600 | hypothetical protein | AT2G13680:CALS5:callose synthase 5 | 1 | Chr05:37711639–37726572 (-) | 4.718e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.611e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 2.397e-13 | |
| Glyma.06G258900 | hypothetical protein | NA | 1 | Chr06:44382191–44386628 (+) | 1.357e-11 | |
| Glyma.06G285200 | hypothetical protein | AT2G31060:EMB2785:elongation factor family protein | 1 | Chr06:47380397–47390651 (+) | 4.471e-11 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 3.68e-12 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 3.68e-12 | |
| Glyma.07G070900 | hypothetical protein | AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein | 1 | Chr07:6443135–6449037 (-) | 7.077e-12 | |
| Glyma.07G071000 | hypothetical protein | AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr07:6464646–6470484 (+) | 2.22e-12 | |
| Glyma.07G087700 | hypothetical protein | AT3G24495:MSH7:MUTS homolog 7 | 1 | Chr07:8111751–8121053 (+) | 1.29e-11 | |
| Glyma.08G338900 | hypothetical protein | NA | 1 | Chr08:45536950–45543029 (-) | 6.921e-13 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.7e-11 | |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 1.26e-11 | |
| Glyma.09G270500 | hypothetical protein | AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 1 | Chr09:48745649–48751140 (+) | 5.14e-12 | |
| Glyma.09G275500 | hypothetical protein | NA | 1 | Chr09:49105837–49106989 (+) | 6.662e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 4.412e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 4.412e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 3.427e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 3.427e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.024e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.024e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.154e-13 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 8.384e-13 | |
| Glyma.13G200600 | hypothetical protein | AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein | 1 | Chr13:31428112–31429431 (-) | 5.24e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 6.094e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 4.324e-11 | |
| Glyma.14G075900 | hypothetical protein | NA | 1 | Chr14:6362111–6364010 (-) | 2.082e-15 | |
| Glyma.14G077100 | hypothetical protein | AT5G42610:AT5G42610:calcium uniporter (DUF607) | 1 | Chr14:6486139–6488935 (+) | 9.089e-12 | |
| Glyma.14G077200 | hypothetical protein | AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein | 1 | Chr14:6498564–6506068 (+) | 9.089e-12 | |
| Glyma.14G077300 | hypothetical protein | AT1G75040:PR5:pathosis-related protein 5 | 1 | Chr14:6508609–6520744 (-) | 9.089e-12 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 6.941e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.203e-12 | |
| Glyma.16G003000 | hypothetical protein | AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein | 1 | Chr16:164584–168767 (+) | 3.638e-12 | |
| Glyma.16G003200 | hypothetical protein | NA | 1 | Chr16:172940–178668 (-) | 3.638e-12 | |
| Glyma.16G003600 | hypothetical protein | AT5G49945:AT5G49945: | 1 | Chr16:198072–202486 (-) | 1.513e-12 | |
| Glyma.16G020500 | hypothetical protein | AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr16:1877938–1879947 (-) | 1.391e-11 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 1.522e-12 | |
| Glyma.16G063600 | hypothetical protein | NA | 1 | Chr16:6255512–6260421 (+) | 4.342e-12 | |
| Glyma.16G064100 | hypothetical protein | NA | 1 | Chr16:6322034–6325343 (-) | 1.265e-11 | |
| Glyma.16G116200 | hypothetical protein | AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr16:25892277–25904773 (+) | 8.429e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 2.858e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 4.931e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 2.993e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 7.475e-12 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 7.475e-12 | |
| Glyma.17G099300 | hypothetical protein | AT3G47610:AT3G47610:transcription regulator/ zinc ion binding protein | 1 | Chr17:7838198–7840795 (-) | 2.132e-15 | |
| Glyma.18G194900 | hypothetical protein | NA | 1 | Chr18:46855096–46855729 (+) | 4.827e-11 | |
| Glyma.18G195500 | hypothetical protein | NA | 1 | Chr18:46967195–46981775 (+) | 5.466e-11 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 4.054e-12 | |
| Glyma.18G298800 | hypothetical protein | NA | 1 | Chr18:57633577–57639546 (+) | 2.58e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 4.618e-14 | |
| Glyma.18G299500 | hypothetical protein | AT2G43160:AT2G43160:ENTH/VHS family protein | 1 | Chr18:57741567–57749794 (+) | 3.752e-11 | |
| Glyma.18G300500 | hypothetical protein | NA | 1 | Chr18:57841316–57843280 (+) | 6.112e-12 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 2.6e-13 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 6.986e-12 | |
| Glyma.19G009900 | hypothetical protein | NA | 1 | Chr19:923053–937826 (-) | 2.677e-12 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 1.125e-15 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 5.221e-16 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 4.036e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 5.743e-13 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 5.968e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 3.655e-17 |