SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 6 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01575 Corynoloxine 365.1209 12.107e-11
P01578 3-Butene-1,2-diol 88.0524 11.82e-13
P01653 No candidate annotation 205.0036 14.565e-13
P01712 Xanthone 196.0491 16.81e-11
P01740 Dehydrocycloguanandin 294.0910 19.655e-12
P01762 1-(2-Hydroxyethoxy)methyl-5-methyluracil 200.0769 11.811e-12
P01833 No candidate annotation 163.0343 15.572e-13
P01861 4-Hydroxy Duloxetine 313.1144 16.037e-11
P01882 Indanestrol 268.1495 15.352e-13
P01910 No candidate annotation 284.5701 18e-11