Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01575

Metabolite ID
P01575
Deionized mass
365.1209 Da
Average m/z
366.1292
Average RT
4.1118
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.388e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.076e-12
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)9.55e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)1.588e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)9.55e-11
Glyma.04G044700 hypothetical protein NA 1Chr04:3569795–3577942 (-)6.473e-11
Glyma.05G131100 hypothetical protein AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 1Chr05:32411641–32419257 (+)6.159e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)6.159e-11
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 1Chr05:32446303–32473428 (+)5.974e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.709e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.178e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.317e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.968e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.968e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)3.978e-13
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)9.559e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.239e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.119e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.239e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.239e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.119e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.107e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)1.334e-11
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)3.537e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)7.531e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.771e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.354e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.901e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.938e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)3.159e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.166e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.482e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.413e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.664e-12
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.837e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.575e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.134e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.388e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.708e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.428e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.942e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.076e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)9.686e-11