Overview Annotation GWAS Evidence Associated genes

P01740

Metabolite ID
P01740
Deionized mass
294.0910 Da
Average m/z
295.0975
Average RT
4.2883
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.587e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)8.159e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.195e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.195e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.846e-15
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)9.267e-13
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)6.224e-12
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)7.25e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.184e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.051e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.764e-12
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 1Chr05:32446303–32473428 (+)1.608e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.195e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)8.773e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.9e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.9e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.445e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.587e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.587e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)9.655e-12
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 1Chr08:17046316–17048640 (-)1.963e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.814e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)8.121e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.83e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.841e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.086e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.398e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.023e-11
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)8.159e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.381e-11
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)6.891e-11
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)1.455e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.259e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.259e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.816e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.896e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.896e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.195e-12
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)4.819e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)4.328e-12
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)3.135e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.363e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.333e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)3.883e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.009e-11
Glyma.15G140500 hypothetical protein NA 1Chr15:11496139–11502209 (-)8.453e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.356e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)7.09e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.612e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.133e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.553e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)8.398e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)8.398e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)6.224e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)4.282e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)6.224e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)3.831e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.546e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.858e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.48e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.48e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.391e-11