SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 167 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48630 1-heptadecylglycerone 3-phosphate 408.2637 12.025e-11
P48704 No candidate annotation 341.2094 16.112e-11
P48705 No candidate annotation 497.3679 14.39e-11
P48842 Physagulin D 620.3563 18.669e-12
P48884 Tegoprazan 387.1385 14.174e-12
P48915 Noberastine 311.1744 15.208e-11
P48941 Chlorphentermine 183.0837 11.356e-11
P48956 Ilginatinib 389.1764 15.888e-16
P49100 Glucoerysodine 461.2087 18.067e-11
P49105 Methyl camaralate 542.3555 12.982e-11