SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 70 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41897 Pyrronamycin B 555.2318 12.94e-11
P41898 No candidate annotation 546.7256 11.568e-14
P41954 No candidate annotation 818.9787 11.37e-11
P41972 No candidate annotation 1050.0241 12.608e-12
P41978 No candidate annotation 745.9516 11.747e-11
P41981 Empenthrin 274.1924 16.278e-11
P41984 CDP-DG(20:5(5Z,8Z,11Z,14Z,16E)-OH(18R)/i-19:0) 1057.5294 11.727e-11
P41997 Bisglaucumlide B 738.4374 12.831e-13
P42002 CDP-DG(a-15:0/18:2(9Z,11Z)) 963.5154 14.766e-11
P42047 No candidate annotation 907.9912 12.789e-13