SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 67 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39987 No candidate annotation 939.4648 17.565e-11
P39989 Kahalalide V 931.4843 19.812e-15
P39997 Avermectin B2b 876.4834 11.576e-11
P40011 Caledonixanthone B 278.0952 12.43e-11
P40102 Ampeloside Bs1 934.4780 14.497e-12
P40174 Penitrem A 633.2856 19.949e-11
P40300 Dibutylphthalic acid 278.1507 11.715e-11
P40346 No candidate annotation 570.1408 11.412e-11
P40362 BL V 424.0812 12.743e-12
P40383 Dimethylphysostigmine 289.1734 12.804e-13