Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P40174

Metabolite ID
P40174
Deionized mass
633.2856 Da
Average m/z
634.2939
Average RT
19.9832
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.057e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.572e-14
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)3.501e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)6.119e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.58e-14
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)4.07e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)2.505e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.998e-14
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)3.878e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.752e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.777e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)9.949e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.817e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)5.696e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.741e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.718e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)3.264e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)1.766e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.45e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)8.686e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.134e-13
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)7.498e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.773e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.254e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.546e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.254e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.254e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.632e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.787e-14
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)7.193e-11
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)2.139e-11
Glyma.16G075800 hypothetical protein AT4G19420:AT4G19420:Pectinacetylesterase family protein 1Chr16:7646131–7651379 (+)8.76e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.057e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.057e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.057e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.057e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.213e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.568e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.202e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.52e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)3.156e-11