SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 34 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19530 No candidate annotation 109.0608 11.193e-12
P19715 N-Hydroxy-N-acetylcadaverine 160.1217 15.209e-11
P19741 Monoglyceride citrate 266.0633 12.967e-11
P19910 Alantrypinone 372.1253 12.263e-13
P19974 Flamprop 321.0555 13.763e-11
P19994 Rilmakalim 401.1311 14.176e-13
P20017 No candidate annotation 343.2428 13.055e-11
P20071 Melochinone 331.1571 15.769e-12
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 11.748e-12
P20181 (2-Naphthyl)methanol 158.0725 16.7e-13