Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19974

Metabolite ID
P19974
Deionized mass
321.0555 Da
Average m/z
322.0614
Average RT
13.1754
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
93
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

93 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.176e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)4.22e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.929e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.392e-12
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 2Chr13:14742455–14747878 (-)7.347e-16
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.118e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)6.013e-12
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)5.482e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.832e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.684e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.684e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.537e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.079e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)4.734e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)6.96e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)6.053e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)6.053e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)6.053e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.387e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.387e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.387e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)3.644e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)2.539e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)2.539e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)2.539e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)2.539e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.986e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.116e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.82e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)8.152e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)8.152e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)8.152e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.929e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.763e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.63e-17
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.399e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.929e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.929e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.929e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.929e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.103e-14
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)6.611e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.877e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.946e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.302e-12
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)5.867e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.422e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.422e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.422e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.422e-14
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)9.152e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.054e-14
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)9.152e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.228e-16
Glyma.12G098000 hypothetical protein NA 1Chr12:8432078–8439545 (+)2.138e-11
Glyma.12G098300 hypothetical protein NA 1Chr12:8458112–8459817 (+)2.138e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.131e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.131e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.426e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.158e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.158e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.088e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)9.369e-17
Glyma.13G052100 hypothetical protein NA 1Chr13:14902730–14924713 (-)9.566e-15
Glyma.13G052800 hypothetical protein NA 1Chr13:15005141–15009623 (+)1.212e-11
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)6.927e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.349e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.552e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.552e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.903e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.004e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.249e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.081e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.081e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.09e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.176e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.176e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.176e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.176e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.183e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.125e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.807e-13
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 1Chr18:3836270–3837813 (+)9.611e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)1.381e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)1.381e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)1.381e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)2.437e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)6.465e-11
Glyma.18G260700 hypothetical protein NA 1Chr18:54660451–54661757 (+)8.469e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.852e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.529e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.926e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)2.129e-13