P20173
Metabolite ID
P20173
Deionized mass
606.2006 Da
Average m/z
607.2079
Average RT
13.2343
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
125
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
125 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G161500 | hypothetical protein | NA | 4 | Chr16:32076715–32092322 (-) | 8.038e-13 | |
| Glyma.06G201700 | hypothetical protein | NA | 3 | Chr06:18577883–18617874 (+) | 1.368e-14 | |
| Glyma.06G313500 | hypothetical protein | NA | 3 | Chr06:50191600–50203098 (-) | 1.13e-14 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 2.323e-12 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 3 | Chr16:30652378–30659548 (+) | 1.734e-15 | |
| Glyma.16G196900 | hypothetical protein | NA | 3 | Chr16:35841279–35846894 (-) | 4.62e-13 | |
| Glyma.03G120100 | hypothetical protein | AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 | 2 | Chr03:33174618–33180955 (+) | 4.055e-16 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 1.111e-12 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 2 | Chr06:50401945–50408153 (+) | 9.026e-12 | |
| Glyma.09G053800 | hypothetical protein | NA | 2 | Chr09:4737413–4755632 (-) | 2.342e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 4.063e-14 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 3.746e-15 | |
| Glyma.16G139000 | hypothetical protein | NA | 2 | Chr16:29623540–29631451 (+) | 2.99e-16 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 2 | Chr16:30514629–30519598 (+) | 2.046e-13 | |
| Glyma.16G145100 | hypothetical protein | NA | 2 | Chr16:30578388–30581421 (-) | 1.734e-15 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 2 | Chr16:35831912–35835153 (+) | 4.289e-12 | |
| Glyma.18G230700 | hypothetical protein | AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) | 2 | Chr18:51943730–51947645 (+) | 3.545e-12 | |
| Glyma.19G127700 | hypothetical protein | AT5G12250:TUB6:beta-6 tubulin | 2 | Chr19:38632803–38635633 (+) | 6.853e-13 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 7.728e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.263e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.263e-12 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr01:56022128–56026001 (+) | 6.558e-11 | |
| Glyma.02G112500 | hypothetical protein | AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein | 1 | Chr02:10910270–10917963 (-) | 2.185e-12 | |
| Glyma.02G112900 | hypothetical protein | AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) | 1 | Chr02:10933057–10936021 (-) | 2.185e-12 | |
| Glyma.02G113000 | hypothetical protein | AT1G69370:CM3:chorismate mutase 3 | 1 | Chr02:10939096–10941983 (-) | 5.169e-16 | |
| Glyma.02G205400 | hypothetical protein | AT5G57880:MPS1:multipolar spindle 1 | 1 | Chr02:39040135–39043181 (-) | 2.823e-11 | |
| Glyma.02G265700 | hypothetical protein | NA | 1 | Chr02:45059017–45060529 (-) | 1.361e-11 | |
| Glyma.03G021600 | hypothetical protein | AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … | 1 | Chr03:2240686–2246512 (-) | 5.095e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 2.2e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 2.797e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 9.152e-17 | |
| Glyma.03G031700 | hypothetical protein | AT1G79600:AT1G79600:Protein kinase superfamily protein | 1 | Chr03:3567906–3572939 (-) | 2.766e-11 | |
| Glyma.03G119400 | hypothetical protein | AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 | 1 | Chr03:33050663–33053094 (+) | 1.86e-14 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 5.663e-16 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 1.525e-15 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 3.94e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 2.473e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 8.616e-12 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 9.312e-13 | |
| Glyma.06G200200 | hypothetical protein | NA | 1 | Chr06:18327920–18331068 (-) | 1.86e-12 | |
| Glyma.06G202000 | hypothetical protein | AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein | 1 | Chr06:18655235–18667810 (-) | 7.337e-13 | |
| Glyma.06G202200 | hypothetical protein | AT1G74310:HSP101:heat shock protein 101 | 1 | Chr06:18712866–18716868 (+) | 2.621e-12 | |
| Glyma.06G203800 | hypothetical protein | NA | 1 | Chr06:19090082–19094822 (-) | 4.923e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 9.457e-13 | |
| Glyma.06G275800 | hypothetical protein | AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta | 1 | Chr06:46677753–46682900 (-) | 9.521e-11 | |
| Glyma.06G309400 | hypothetical protein | AT5G07040:AT5G07040:RING/U-box superfamily protein | 1 | Chr06:49792092–49792649 (+) | 4.858e-11 | |
| Glyma.06G316500 | hypothetical protein | AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein | 1 | Chr06:50531222–50538652 (-) | 3.992e-12 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 1.748e-12 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 2.876e-14 |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 1.579e-12 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 5.438e-13 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 1.196e-11 | |
| Glyma.08G239500 | hypothetical protein | AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:20444715–20447665 (-) | 5.764e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.215e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 2.726e-11 | |
| Glyma.09G167000 | hypothetical protein | NA | 1 | Chr09:39103764–39109664 (-) | 8.932e-11 | |
| Glyma.09G202900 | hypothetical protein | AT5G10560:AT5G10560:Glycosyl hydrolase family protein | 1 | Chr09:42685911–42690981 (-) | 3.289e-11 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 1.101e-11 | |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 4.057e-12 | |
| Glyma.09G270500 | hypothetical protein | AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 1 | Chr09:48745649–48751140 (+) | 8.217e-12 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1 | Chr09:49863377–49871270 (+) | 3.202e-13 | |
| Glyma.11G061800 | hypothetical protein | NA | 1 | Chr11:4632831–4633552 (+) | 1.787e-12 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 1.961e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.98e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 1.98e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 2.323e-12 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 2.427e-11 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 2.136e-17 | |
| Glyma.13G156200 | hypothetical protein | AT1G80710:DRS1:DROUGHT SENSITIVE 1 | 1 | Chr13:27115515–27118951 (+) | 1.358e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 2.33e-11 | |
| Glyma.14G082300 | hypothetical protein | AT5G42750:BKI1:BRI1 kinase inhibitor 1 | 1 | Chr14:7130733–7132305 (+) | 6.239e-11 | |
| Glyma.15G070100 | hypothetical protein | AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 1 | Chr15:5355553–5364428 (+) | 3.481e-12 | |
| Glyma.15G071600 | hypothetical protein | AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein | 1 | Chr15:5481672–5488866 (-) | 3.481e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 1.208e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 1.696e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 1.208e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 1.208e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.143e-12 | |
| Glyma.15G275100 | hypothetical protein | AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein | 1 | Chr15:51350998–51355557 (-) | 1.4e-11 | |
| Glyma.16G003000 | hypothetical protein | AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein | 1 | Chr16:164584–168767 (+) | 1.082e-11 | |
| Glyma.16G003200 | hypothetical protein | NA | 1 | Chr16:172940–178668 (-) | 1.082e-11 | |
| Glyma.16G003600 | hypothetical protein | AT5G49945:AT5G49945: | 1 | Chr16:198072–202486 (-) | 4.38e-12 | |
| Glyma.16G020500 | hypothetical protein | AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr16:1877938–1879947 (-) | 7.61e-12 | |
| Glyma.16G032000 | hypothetical protein | AT4G01270:AT4G01270:RING/U-box superfamily protein | 1 | Chr16:3031286–3036010 (+) | 5.181e-12 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 3.485e-12 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 2.614e-11 | |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 2.262e-11 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 4.653e-18 | |
| Glyma.16G057700 | hypothetical protein | AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr16:5656328–5663040 (-) | 7.242e-13 | |
| Glyma.16G058000 | hypothetical protein | AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein | 1 | Chr16:5674056–5677758 (+) | 1.732e-12 | |
| Glyma.16G058100 | hypothetical protein | AT5G14180:MPL1:Myzus persicae-induced lipase 1 | 1 | Chr16:5685464–5692098 (+) | 2.323e-15 | |
| Glyma.16G058800 | hypothetical protein | AT5G57890:AT5G57890:Glutamine amidotransferase type 1 family protein__AT1G25155:AT1G24909:Glutamine amidotransferase ty… | 1 | Chr16:5763908–5768668 (+) | 6.271e-13 | |
| Glyma.16G066000 | hypothetical protein | AT5G40660:AT5G40660:ATP12 protein-like protein | 1 | Chr16:6570689–6574950 (+) | 1.465e-11 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 3.358e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 6.412e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 1.211e-14 | |
| Glyma.16G138800 | hypothetical protein | NA | 1 | Chr16:29609432–29615000 (+) | 3.41e-12 | |
| Glyma.16G138900 | hypothetical protein | NA | 1 | Chr16:29620531–29621995 (+) | 3.699e-12 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 6.893e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 4.986e-12 | |
| Glyma.16G142300 | hypothetical protein | AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein | 1 | Chr16:30086178–30091466 (-) | 1.052e-15 | |
| Glyma.16G143400 | hypothetical protein | NA | 1 | Chr16:30337469–30338390 (-) | 2.153e-13 | |
| Glyma.16G143700 | hypothetical protein | AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 | 1 | Chr16:30388030–30390647 (-) | 9.737e-11 | |
| Glyma.16G144100 | hypothetical protein | NA | 1 | Chr16:30432951–30434052 (-) | 4.347e-12 | |
| Glyma.16G145200 | hypothetical protein | NA | 1 | Chr16:30586018–30588859 (-) | 1.678e-11 | |
| Glyma.16G145300 | hypothetical protein | AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 | 1 | Chr16:30604586–30608656 (+) | 4.062e-12 | |
| Glyma.16G145500 | hypothetical protein | AT2G39200:MLO12:Seven transmembrane MLO family protein | 1 | Chr16:30630177–30636253 (+) | 1.771e-12 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 2.311e-13 | |
| Glyma.16G147400 | hypothetical protein | NA | 1 | Chr16:30817535–30821568 (+) | 1.08e-11 | |
| Glyma.16G159100 | hypothetical protein | NA | 1 | Chr16:31889835–31894662 (+) | 5.815e-11 | |
| Glyma.16G160900 | hypothetical protein | NA | 1 | Chr16:32013447–32016235 (+) | 2.559e-11 | |
| Glyma.16G161000 | hypothetical protein | NA | 1 | Chr16:32027849–32031609 (-) | 8.199e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 7.998e-14 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 1.003e-13 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 7.907e-12 |
| Glyma.18G091600 | hypothetical protein | NA | 1 | Chr18:9165090–9166656 (-) | 3.157e-14 | |
| Glyma.18G112600 | hypothetical protein | NA | 1 | Chr18:13398219–13405422 (+) | 1.264e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 6.154e-11 | |
| Glyma.18G298600 | hypothetical protein | AT1G44960:AT1G44960:SNARE associated Golgi protein family | 1 | Chr18:57614292–57617223 (+) | 5.066e-12 | |
| Glyma.18G298800 | hypothetical protein | NA | 1 | Chr18:57633577–57639546 (+) | 2.147e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 2.139e-11 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 1.53e-11 | |
| Glyma.19G127500 | hypothetical protein | NA | 1 | Chr19:38615244–38616720 (-) | 3.469e-18 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 1.613e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 3.395e-12 |