Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19715

Metabolite ID
P19715
Deionized mass
160.1217 Da
Average m/z
161.1304
Average RT
13.1039
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)2.158e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.422e-15
Glyma.09G057000 hypothetical protein NA 2Chr09:5140625–5145658 (+)2.723e-14
Glyma.16G213000 hypothetical protein AT1G48380:RHL1:root hair initiation protein root hairless 1 (RHL1) 2Chr16:37118629–37125494 (-)4.68e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.963e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.964e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.487e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.485e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.494e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.494e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)9.886e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.627e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.501e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)6.606e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.209e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.293e-13
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)5.273e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.609e-11
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 1Chr08:17046316–17048640 (-)9.919e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.112e-11
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)4.727e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)2.32e-12
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)3.523e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.297e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.856e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.171e-13
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)8.265e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.243e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)9.113e-11
Glyma.11G015900 hypothetical protein AT5G12410:AT5G12410:THUMP domain-containing protein 1Chr11:1113088–1117922 (+)1.186e-11
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)6.783e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.08e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.08e-11
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)5.827e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)3.342e-12
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)8.973e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.039e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.693e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.433e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)2.158e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)7.129e-11
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)8.797e-13
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)9.982e-11
Glyma.18G257800 hypothetical protein NA 1Chr18:54346048–54349189 (+)3.39e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.496e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.857e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.857e-15
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.235e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.509e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.096e-12