SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G204200

Description hypothetical protein

Gene interval Chr06:19170925–19173352 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features72Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

72 matching features · page 6 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37046 Baiyunoside 596.3161 15.695e-11
P37150 Aurasperone E 588.1720 17.711e-11
P37296 Chokol F 240.1729 14.055e-12
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 13.292e-11
P38074 1-(2-methoxy-tetracosanyl)-sn-glycero-3-phosphoserine 625.4301 12.845e-11
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 17.446e-11
P40346 No candidate annotation 570.1408 13.449e-11
P40362 BL V 424.0812 15.298e-11
P40695 Bacopasaponin A 736.4305 19.146e-12
P41500 2-Isopropylfuran 110.0721 13.685e-11