Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37046

Metabolite ID
P37046
Deionized mass
596.3161 Da
Average m/z
597.3229
Average RT
18.4208
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)1.384e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.981e-12
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)8.718e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)6.29e-18
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.533e-13
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)1.651e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)4.073e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.961e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)8.766e-14
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)6.283e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.16e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.881e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.283e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.826e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.826e-13
Glyma.06G204200 hypothetical protein AT5G08050:AT5G08050:wiskott-aldrich syndrome family protein, putative (DUF1118) 1Chr06:19170925–19173352 (+)5.695e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)4.464e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)4.464e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)4.464e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)4.465e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)4.465e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)4.464e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)4.464e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)4.464e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)4.464e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)4.464e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.343e-14
Glyma.07G058300 hypothetical protein AT1G01450:AT1G01450:Protein kinase superfamily protein 1Chr07:5208488–5211264 (-)5.84e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)7.873e-11
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)5.267e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.334e-11
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)9.727e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.047e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.314e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.314e-15
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)2.979e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.314e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.314e-15
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)3.761e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)3.761e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)3.761e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.68e-15
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)6.239e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.185e-11
Glyma.12G098200 hypothetical protein AT2G32480:ARASP:chloroplastic membrane metallo proteases__AT1G05140:AT1G05140:Peptidase M50 family protein 1Chr12:8452063–8456493 (+)9.849e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.936e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.936e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.533e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.781e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.781e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.781e-12
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)7.585e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.894e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)6.778e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)6.778e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.439e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.593e-14
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)4.991e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.283e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.982e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.982e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.727e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.595e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.394e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.42e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)2.957e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.495e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)8.134e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.934e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.934e-12