SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.06G183500

Description hypothetical protein

Gene interval Chr06:15828917–15834067 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G50000:AT5G50000:Protein kinase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓

Associated metabolite features320Overlap

Maximum supporting SNP records3

Features with ≥2 supporting SNP records320

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

AT5G50000NCBI Gene ↗UniProt ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 13 of 32

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P18237	(S)-2-Hydroxy-2-phenylacetonitrile O-[b-D-apiosyl-(1->2)-b-D-glucoside]	427.1460	2	5.823e-13
P18633	Butanedioic acid, octenyl-	228.1353	2	5.6e-11
P18669	2'-O-Apiosylphyllocactin	768.1781	2	3.062e-11
P18799	No candidate annotation	731.2215	2	1.062e-11
P18929	Deptropine	333.2119	2	1.535e-11
P19398	2-(12-chloro-dodecanoyloxy)-propanoic acid	306.1638	2	1.153e-13
P19454	Elexacaftor/Ivacaftor/Tezacaftor	597.2438	2	6.43e-13
P19492	2-Deoxystreptidine	246.1435	2	2.339e-12
P19653	No candidate annotation	750.2553	2	2.757e-11
P20017	No candidate annotation	343.2428	2	1.629e-11