Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18633

Metabolite ID
P18633
Deionized mass
228.1353 Da
Average m/z
229.1411
Average RT
12.8073
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
151
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

151 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.466e-13
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)5.337e-11
Glyma.08G300400 hypothetical protein AT2G02910:AT2G02910:transmembrane protein (DUF616) 3Chr08:41830891–41843406 (-)9.019e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.009e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)3.144e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)7.174e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.809e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)5.276e-12
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)1.943e-12
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)3.944e-11
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)5.337e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)5.6e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)9.248e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.226e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.142e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.169e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.349e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.001e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.001e-14
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 2Chr13:31720004–31725252 (+)3.144e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)7.37e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.466e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.164e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)9.28e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.293e-12
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)5.337e-11
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)4.737e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.552e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)5.068e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.275e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)6.731e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.637e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.594e-12
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.23e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.514e-11
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 1Chr03:44616824–44621636 (-)8.306e-12
Glyma.03G252800 hypothetical protein AT5G18430:AT5G18430:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr03:44849419–44851672 (+)4.517e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.496e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)6.985e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.31e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.375e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.375e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.375e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)5.337e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.328e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.932e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.397e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.451e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.698e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.221e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.221e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.221e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.434e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.434e-12
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)2.068e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)2.068e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)2.068e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)2.068e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)2.068e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)2.068e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)2.068e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)2.068e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)2.068e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)2.068e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)7.738e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)7.738e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)7.738e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.994e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.241e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.994e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.994e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.241e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)5.191e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)5.158e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)6.038e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)6.038e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.707e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.707e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)6.624e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.65e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.142e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.142e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.142e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.142e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.319e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)3.935e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)5.224e-11
Glyma.08G299800 hypothetical protein NA 1Chr08:41795912–41796546 (+)2.893e-11
Glyma.08G300000 hypothetical protein NA 1Chr08:41812728–41812868 (+)9.019e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)6.653e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)8.867e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.305e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.272e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.013e-12
Glyma.09G168700 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr09:39338715–39352099 (-)8.894e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.906e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.906e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.906e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.906e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.31e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.745e-14
Glyma.10G221500 hypothetical protein AT1G22770:GI:gigantea protein (GI) 1Chr10:45294735–45316121 (+)5.193e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)4.227e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.06e-13
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)5.999e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.534e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.534e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.349e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.034e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.278e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.009e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.665e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.583e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.583e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.001e-14
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)2.374e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)3.144e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.768e-14
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.409e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)9.692e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.194e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.627e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.194e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.194e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.714e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.297e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)9.993e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.049e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.619e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.809e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.809e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.773e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.275e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.262e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)9.346e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.501e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.124e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.174e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.174e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)2.916e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)6.097e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)6.097e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)6.097e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)4.398e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.196e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.763e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.436e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.436e-12
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)3.042e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.241e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.107e-11