SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G168700

Description hypothetical protein

Gene interval Chr06:14104416–14111842 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G63520:AT5G63520:F-box/LRR protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features83Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records37

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4458.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

83 matching features · page 8 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42930 No candidate annotation 1945.0318 11.024e-12
P43364 No candidate annotation 811.3777 15.268e-11
P43463 PGP(18:1(9Z)/20:4(6E,8Z,11Z,13E)-2OH(5S,15S)) 908.4845 16.954e-11
P44053 3beta-hydroxy-7beta-N-acetylglucosaminylchol-5-en-24-oyltaurine 702.3288 18.539e-12
P44969 cis-Caseadine N-oxide 357.1537 17.901e-12
P46681 Selanc 751.4280 18.676e-11
P49852 Ilicifolioside C 614.2394 18.142e-14
P50979 No candidate annotation 261.2154 12.994e-11
P51460 Veliparib 244.1327 18.342e-11
P51496 N-Desisopropyl Pentisomide 277.2110 12.817e-11