SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 8 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00974 Sertraline 305.0751 11.451e-12
P00976 2-hydroxy-3-methylbutanedioylcarnitine 291.1301 14.581e-12
P00993 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0665 14.961e-12
P01028 Lamiridosin A 260.0890 14.514e-14
P01041 No candidate annotation 482.0337 11.159e-11
P01090 No candidate annotation 403.5251 11.649e-11
P01095 Capillaridin A 352.1111 15.454e-16
P01114 No candidate annotation 149.0104 18.155e-14
P01132 No candidate annotation 600.0524 11.783e-14
P01138 5-FU 130.0188 18.155e-13