Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01095

Metabolite ID
P01095
Deionized mass
352.1111 Da
Average m/z
353.1192
Average RT
3.7721
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
96
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

96 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.419e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.672e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.813e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)8.203e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.698e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.824e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.419e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.059e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.751e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.228e-13
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)9.036e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.165e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.444e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.61e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.228e-15
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)6.709e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.407e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.377e-15
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.003e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.002e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.454e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.299e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.299e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.299e-15
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)7.421e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.919e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)4.868e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.609e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.133e-19
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.428e-19
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.251e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.58e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.533e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.533e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.533e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)4.888e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.698e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.698e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.698e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.698e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)9.111e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)9.111e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.08e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.183e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.524e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.885e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)7.465e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)7.044e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.878e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.98e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.98e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.98e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.98e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.629e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.782e-12
Glyma.11G022000 hypothetical protein NA 1Chr11:1561152–1561574 (+)8.263e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)1.195e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.585e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.585e-14
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.934e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.934e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.498e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.258e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.285e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)5.286e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.286e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.734e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.131e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)4.763e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.763e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.489e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.098e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.489e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.489e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.52e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.672e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.672e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.672e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.672e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.13e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.906e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.956e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.11e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.813e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)9.728e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)9.727e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)9.819e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)2.133e-11
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)1.259e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.346e-11
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 1Chr19:45183357–45185175 (-)3.967e-13
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 1Chr19:45201612–45206816 (+)3.967e-13
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 1Chr19:45215929–45223182 (+)3.967e-13
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 1Chr19:45273343–45277374 (-)9.407e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)8.394e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.112e-12