SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 53 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08878 Caffeic acid sulfate 259.9968 18.37e-11
P08885 (5R,6S)-5,6-Epoxy-7-megastigmen-9-one 208.1431 11.157e-12
P08896 4-Deoxypyridoxine 153.0769 18.279e-13
P08905 Lofexidine 258.0304 14.572e-12
P08907 Phosphomethylphosphonic acid adenosyl ester 425.0494 11.967e-13
P09010 No candidate annotation 283.1491 12.783e-12
P09012 No candidate annotation 286.9734 16.612e-11
P09032 10,20-Dehydro[12,13-dehydroprolyl]-2-(1',1'-dimethylallyltryptophyl)diketopiperazine 347.1648 12.723e-12
P09042 Siphonol E 736.2692 11.08e-18
P09068 threo-Syringoylglycerol 244.0933 14.282e-16