Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09012

Metabolite ID
P09012
Deionized mass
286.9734 Da
Average m/z
287.9788
Average RT
9.9919
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.982e-13
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)2.777e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)2.178e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)7.795e-13
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 2Chr08:14738283–14742033 (+)5.224e-11
Glyma.18G273000 hypothetical protein NA 2Chr18:55575628–55582063 (-)3.636e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.982e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.503e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.705e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)8.947e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.602e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.602e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.602e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.602e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.602e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.602e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.602e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)2.178e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)6.737e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.445e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.445e-13
Glyma.03G022200 hypothetical protein NA 1Chr03:2326204–2327764 (+)4.27e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.821e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.612e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.724e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.724e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.724e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.183e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.183e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.183e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)9.738e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)9.738e-11
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)4.617e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)2.566e-12
Glyma.08G183800 hypothetical protein NA 1Chr08:14744295–14744525 (+)5.224e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)1.26e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)2.81e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.975e-13
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.915e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.072e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.98e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.786e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.283e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.283e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.283e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.401e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.401e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.398e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.398e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.398e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.303e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.626e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.866e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.787e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.302e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.506e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)4.057e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.113e-13
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.435e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.435e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.914e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)5.914e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.052e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)7.098e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)3.505e-12
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)9.429e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.204e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)6.619e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)7.681e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.872e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.873e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.328e-13