SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 356 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53532 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0636 11.177e-12
P53538 2-Propylphenol 136.0864 15.419e-16
P53547 PA(i-12:0/5-iso PGF2VI) 662.3876 15.004e-11
P53549 No candidate annotation 398.0436 14.401e-12
P53552 Antibiotic KA 7367B 200.1542 17.965e-12
P53574 Glycyl-prolyl-arginyl-valyl-valyl-glutamic acid 655.3649 13.468e-11
P53600 No candidate annotation 398.0511 11.292e-13
P53605 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one 312.2120 13.657e-12
P53640 Luteolin 7-(6''-malonylneohesperidoside) 680.1624 11.463e-11
P53660 Tiegusanin E 650.2688 14.4e-16