SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 346 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P51417 Consolinine 451.2851 13.391e-13
P51422 (+)-Validoxylamine G 351.1529 15.019e-12
P51460 Veliparib 244.1327 17.883e-13
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 11.837e-14
P51572 Lactapiperanol C 282.1825 13.06e-13
P51595 7-Acetyl-3,6-dihydroxy-8-methyl-alpha-tetralone 234.0905 15.035e-14
P51609 3-Acetylcalcicolin A 576.2553 19.872e-11
P51616 Sarmentamide A 215.0989 16.93e-11
P51638 Dihydroisomorphine-6-glucuronide 463.1841 15.946e-11
P51641 1,2-Bis(2-(4,5-dihydro-1H-imidazol-2-yl)propan-2-yl)diazene 250.1873 19.799e-15