SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 332 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48710 No candidate annotation 275.1941 14.163e-11
P48717 (2R,3R)-2-amino-3-hydroxy-15-methylhexadecane-1-sulfonic acid 351.2489 11.65e-12
P48742 Ampeloside Bs1 934.4710 14.5e-13
P48752 Apronal 184.1230 12.741e-12
P48759 No candidate annotation 257.1835 13.435e-14
P48814 1-(11,12-Methyleneoctadecanoyl)-sn-glycero-2,3-cyclic phosphate 432.2624 17.496e-15
P48815 N-Palmitoyltaurine 363.2462 12.892e-14
P48869 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1465 11.296e-11
P48892 (3E,5Z)-1,3,5-Heptatriene 94.0774 12.621e-13
P48972 No candidate annotation 152.1164 13.594e-12