SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 315 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46267 Arginyl-glycyl-aspartic acid 346.1599 14.348e-13
P46334 Chenodeoxycholylglutamic acid 521.3322 12.81e-11
P46395 dehydro-beta-Ionone 190.1332 12.201e-11
P46406 trans-3-Feruloylcorosolic acid 648.3959 12.872e-14
P46409 16-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2E-hexadecenoic acid 400.2795 18.306e-14
P46446 Ixabepilone 506.2833 18.577e-12
P46449 Rapisterone 508.3341 12.04e-11
P46452 No candidate annotation 870.3660 18.741e-16
P46457 1-Isopropyl-N-((6-methyl-2-oxo-4-propyl-1,2-dihydropyridin-3-yl)methyl)-6-(2-(4-methylpiperazin-1-yl)pyridin-4-yl)-1H-indazole-4-carboxamide 541.3120 12.068e-11
P46460 xi-5-Isopropyl-2(5H)-furanone 126.0668 14.211e-12