SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 290 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42247 No candidate annotation 1096.0138 12.601e-11
P42267 Levetiracetam 170.1068 14.029e-12
P42275 N-Stearoyl Aspartic acid 399.2945 12.641e-13
P42277 2beta-Hydroxytestosterone 304.2005 11.494e-16
P42290 No candidate annotation 446.1690 12.451e-12
P42298 2-Nitrophenyl octyl ether 251.1548 15.652e-12
P42303 Swietenitin C 814.3052 11.779e-15
P42312 PGP(i-13:0/PGJ2) 838.4169 12.148e-13
P42351 Pulicanol 312.1939 11.303e-11
P42354 No candidate annotation 1044.2354 13.24e-17