P42312
Metabolite ID
P42312
Deionized mass
838.4169 Da
Average m/z
839.4238
Average RT
21.3175
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
88
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
88 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 9.865e-12 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 5.38e-12 | |
| Glyma.04G086600 | hypothetical protein | NA | 2 | Chr04:7374806–7380808 (+) | 1.604e-13 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 3.689e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 2.04e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 2.04e-13 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 5.422e-11 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 1.006e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 9.37e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 9.37e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 5.326e-11 | |
| Glyma.03G008300 | hypothetical protein | AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 | 1 | Chr03:801855–806650 (-) | 4.032e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 2.206e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 7.164e-15 | |
| Glyma.03G124500 | hypothetical protein | NA | 1 | Chr03:33758928–33762195 (+) | 2.425e-13 | |
| Glyma.04G014300 | hypothetical protein | AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | Chr04:1101709–1106543 (+) | 8.426e-12 | |
| Glyma.04G014600 | hypothetical protein | NA | 1 | Chr04:1119108–1123175 (+) | 8.426e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 5.518e-12 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 3.078e-14 | |
| Glyma.04G084600 | hypothetical protein | NA | 1 | Chr04:7171949–7173688 (+) | 3.771e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 3.557e-13 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 1.963e-12 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 4.726e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 3.846e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 3.846e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.148e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 3.517e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 3.517e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 3.517e-13 | |
| Glyma.05G130700 | hypothetical protein | AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr05:32376592–32384905 (+) | 1.668e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 8.513e-11 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 1.096e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 9.591e-15 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 2.268e-16 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 2.299e-11 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 2.299e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 6.341e-11 |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.706e-16 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 6.101e-11 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 9.165e-12 | |
| Glyma.09G238200 | NIP2-1 | putative Si transporter NIP2-1 | NA | 1 | Chr09:46029192–46034136 (+) | 2.434e-11 |
| Glyma.10G172600 | hypothetical protein | AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein | 1 | Chr10:40628401–40633140 (-) | 1.692e-12 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 5.419e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 3.742e-12 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 3.742e-12 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 3.742e-12 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 3.742e-12 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 6.019e-11 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 8.143e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 8.143e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 8.143e-11 | |
| Glyma.11G165300 | hypothetical protein | AT3G18220:LPP4:Phosphatidic acid phosphatase (PAP2) family protein | 1 | Chr11:15738707–15742464 (+) | 7.57e-11 | |
| Glyma.11G165400 | hypothetical protein | NA | 1 | Chr11:15755004–15756199 (+) | 7.57e-11 | |
| Glyma.11G165500 | hypothetical protein | NA | 1 | Chr11:15756251–15760166 (+) | 7.57e-11 | |
| Glyma.11G182600 | hypothetical protein | AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein | 1 | Chr11:24998933–25003549 (-) | 3.095e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.897e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.897e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 2.838e-13 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 2.838e-13 | |
| Glyma.13G049100 | hypothetical protein | NA | 1 | Chr13:14498952–14506408 (-) | 9.72e-11 | |
| Glyma.13G062200 | hypothetical protein | AT5G15270:AT5G15270:RNA-binding KH domain-containing protein | 1 | Chr13:15985083–15991185 (-) | 8.51e-11 | |
| Glyma.13G062500 | hypothetical protein | NA | 1 | Chr13:16016181–16019533 (-) | 8.51e-11 | |
| Glyma.13G062700 | hypothetical protein | AT3G01180:SS2:starch synthase 2 | 1 | Chr13:16045152–16059846 (-) | 2.409e-11 | |
| Glyma.13G062800 | hypothetical protein | AT5G48600:SMC3:structural maintenance of chromosome 3 | 1 | Chr13:16067222–16078901 (-) | 2.409e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 3.689e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.231e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.231e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 2.04e-13 | |
| Glyma.13G142200 | hypothetical protein | AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 | 1 | Chr13:25483702–25502265 (+) | 1.076e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 8.379e-12 | |
| Glyma.14G190100 | hypothetical protein | AT2G04280:AT2G04280:calcium ion-binding protein | 1 | Chr14:45502008–45504459 (+) | 5.247e-13 | |
| Glyma.14G190300 | hypothetical protein | AT2G04240:XERICO:RING/U-box superfamily protein | 1 | Chr14:45531920–45533895 (-) | 4.192e-12 | |
| Glyma.14G190400 | hypothetical protein | AT3G07650:COL9:CONSTANS-like 9 | 1 | Chr14:45536719–45544087 (-) | 4.192e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.184e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 6.829e-14 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 1.347e-14 | |
| Glyma.15G262200 | hypothetical protein | AT3G12760:AT3G12760:defective in cullin neddylation protein | 1 | Chr15:49465185–49472595 (-) | 2.927e-12 | |
| Glyma.15G262400 | hypothetical protein | AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein | 1 | Chr15:49495728–49499550 (+) | 3.072e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 4.107e-12 | |
| Glyma.16G205600 | hypothetical protein | AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein | 1 | Chr16:36633000–36634978 (+) | 4.156e-12 | |
| Glyma.17G121800 | hypothetical protein | AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 | 1 | Chr17:9746590–9748712 (+) | 5.353e-13 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 3.064e-11 | |
| Glyma.18G045000 | hypothetical protein | AT5G45130:RHA1:Ras small GTP-binding family protein | 1 | Chr18:3889384–3895138 (-) | 7.114e-12 | |
| Glyma.18G048700 | hypothetical protein | NA | 1 | Chr18:4191224–4196633 (+) | 4.728e-12 | |
| Glyma.18G049200 | hypothetical protein | AT3G54210:AT3G54210:Ribosomal protein L17 family protein | 1 | Chr18:4232694–4235086 (+) | 4.774e-11 | |
| Glyma.18G050000 | hypothetical protein | NA | 1 | Chr18:4309070–4316534 (-) | 1.771e-12 | |
| Glyma.20G105500 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… | 1 | Chr20:34813357–34815998 (-) | 7.463e-11 | |
| Glyma.20G107500 | hypothetical protein | AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr20:35011922–35015196 (-) | 6.142e-11 |