SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 228 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32857 1-(9Z-octadecenoyl)-2-(5-oxo-valeroyl)-sn-glycero-3-phosphoserine 621.3358 18.122e-15
P32877 2-(4-(Methylamino)phenyl)benzo[d]thiazol-6-ol 256.0679 19.353e-13
P32880 24-Nor-5beta-cholane-3alpha,7alpha,12alpha,22,23-pentol 396.2848 15.668e-11
P32883 1-(9Z-octadecenoyl)-2-(9-oxo-nonanoyl)-sn-glycero-3-phosphoethanolamine 633.3895 15.622e-13
P32890 2-Hydroxy-3-[(2-carboxyethyl)thio]-3-[2-(8-phenyloctyl)phenyl]propanoic acid 458.2131 13.02e-11
P32910 10'-Hydroxyusambarensine 448.2284 13.987e-19
P32922 Sanggenon G 694.2471 15.997e-12
P32963 Tuberactinomycin O 669.3322 17.475e-11
P32974 No candidate annotation 499.7155 17.422e-12
P33010 No candidate annotation 547.1406 16.574e-11