SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 199 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28722 3-tridecylphenol 276.2419 11.374e-15
P28730 Carpachromene dimethyl ether 364.1309 14.253e-12
P28775 N-Acetyl-7-O-acetylneuraminate 351.1174 11.205e-11
P28793 Emarginatine E 814.2665 15.522e-11
P28799 alpha-N-Carbomethoxyacetyl-D-4-chlorotryptophan 338.0655 18.282e-11
P28829 O-Methyltubulosine 489.2945 14.401e-17
P28855 No candidate annotation 954.3472 11.496e-12
P28859 PA(10:0/13:0) 522.3332 19.67e-12
P28862 Perrottetin F 442.1789 11.078e-11
P28877 Khonklonginol G 420.1914 14.216e-14