SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 200 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28885 Staphylopine 328.1394 14.702e-13
P28903 (5E,7E)-(1S,3S)-4,4-difluoro-9,10-seco-5,7,10(19)-cholestatriene-1,3,25-triol 452.3128 13.504e-12
P28922 1-hexadecanoyl-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-myo-inositol) 670.3308 12.146e-15
P28935 Glucopyranosylmoranoline 325.1355 11.127e-12
P28936 No candidate annotation 505.2470 18.177e-14
P28958 7,5'-Dihydroxy-5,4'-dimethoxy-3'-prenylisoflavone 7-O-galactoside 544.1927 15.163e-12
P28959 1-[2-(Benzhydryloxy)ethyl]piperidine-4-acetic acid ethyl ester 381.2266 12.042e-11
P28972 Irumamycin 763.4535 12.637e-13
P28981 Sarecycline 487.1957 11.305e-12
P28998 Gliovictin 354.1083 13.975e-11