SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 194 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28140 No candidate annotation 161.0916 17.906e-12
P28153 Dehydroprotostemonine 415.2032 18.343e-19
P28167 Nigakilactone E 450.2232 13.093e-11
P28168 No candidate annotation 1092.3358 11.585e-14
P28189 LysoPS(18:2(9Z,12Z)/0:0) 521.2764 18.737e-11
P28229 4-Acetylimidazo[4,5-c]pyridine 161.0572 13.14e-12
P28246 PA(2:0/PGJ2) 530.2289 18.719e-11
P28252 Hypochoeroside K 398.2271 12.179e-12
P28273 No candidate annotation 222.1930 14.791e-13
P28280 No candidate annotation 913.3376 12.268e-11