SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 158 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22796 Argylioside 704.2463 15.129e-14
P22801 CDP-DG(20:4(6Z,8E,10E,14Z)-2OH(5S,12R)/i-14:0) 1005.4791 18.809e-12
P22812 7-Hydroxy-5-methoxy-6-methylflavan-(2beta->7,4beta->8)-7-hydroxy-5-methoxyflavan 522.2038 15.873e-14
P22821 Paroxetine 329.1451 14.044e-11
P22831 3-(Cyclohexylamino)-2-hydroxy-1-propanesulfonic acid 237.1061 18.637e-11
P22849 No candidate annotation 340.5589 11.54e-11
P22886 N-(3-oxo-heptanoyl)-homoserine lactone 227.1118 11.642e-11
P22895 FD 212 268.1299 16.305e-16
P22928 5'-Methoxybilobetin 582.1182 13.741e-16
P22940 No candidate annotation 1006.2320 11.754e-11