Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22886

Metabolite ID
P22886
Deionized mass
227.1118 Da
Average m/z
228.1210
Average RT
13.9740
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.247e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.048e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.888e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.011e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.011e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.144e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.247e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)1.095e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.256e-15
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.765e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)9.337e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)7.258e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.812e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.908e-14
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)7.412e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)5.341e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.431e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)5.165e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)5.165e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.642e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.79e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.79e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.79e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.631e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)6.926e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.406e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)7.86e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)7.86e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)7.86e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.969e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.048e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.048e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.048e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.048e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)4.958e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.317e-11
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter famil… 1Chr11:7666–11455 (+)4.496e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.219e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.726e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.362e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.363e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.011e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.124e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.081e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.364e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.081e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.081e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.595e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.306e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.044e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.691e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.075e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)9.072e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.062e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.203e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.144e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.988e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.988e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)7.551e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.101e-11
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)3.57e-11