SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 152 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P21903 Triptregeline H 611.2282 13.203e-22
P21913 Eremosulphoxinolide A 464.1861 12.043e-12
P21946 No candidate annotation 999.3356 14.786e-14
P21951 3-O-Isobutyrylkinamycin C 566.1508 12.763e-12
P21968 Thymidine 3',5'-cyclic monophosphate 304.0452 14.265e-11
P21973 Glisentide 445.1675 11.439e-11
P22004 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1055 19.518e-15
P22005 No candidate annotation 820.2022 15.654e-13
P22057 Mangostenone B 462.2040 15.94e-16
P22088 No candidate annotation 905.3648 18.435e-11