Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22005

Metabolite ID
P22005
Deionized mass
820.2022 Da
Average m/z
821.2127
Average RT
13.7484
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)4.294e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.294e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 2Chr05:32421116–32425198 (-)1.304e-13
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)6.493e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)6.493e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)6.493e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.321e-12
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)3.105e-15
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)3.863e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)3.735e-11
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 1Chr02:10910270–10917963 (-)8.514e-12
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 1Chr02:10933057–10936021 (-)8.514e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)6.105e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.311e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.409e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.775e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)2.118e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.365e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.556e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.654e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.872e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.872e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.872e-12
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)3.965e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)9.791e-15
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.773e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.544e-23
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.935e-24
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.195e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.975e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.975e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)1.283e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)7.425e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.162e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)7.425e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)7.425e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.162e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.949e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)4.77e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)6.493e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)6.493e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)6.491e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)6.493e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)6.493e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)3.831e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.755e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.755e-15
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.755e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.755e-15
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.907e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.118e-13
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)7.394e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.474e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.376e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.474e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.474e-14
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)3.417e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.679e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)5.825e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.525e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)3.389e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.294e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.294e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.433e-15
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)4.984e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.531e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.531e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)1.223e-13
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)9.904e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.824e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.028e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.35e-11