SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 30 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 12.67e-13
P07895 Sporovexin C 309.1220 19.25e-11
P07903 Coptisine 319.0848 11.218e-13
P07924 2-[(Isopropylthio)methyl]furan 156.0609 14.22e-12
P07929 Glycozolone A 252.1271 11.36e-14
P07942 7-Methoxypradimicinone II 579.1452 14.236e-11
P07969 No candidate annotation 126.0613 14.185e-13
P08028 Fipexide 388.1183 12.681e-11
P08052 L-Arogenate 227.0777 14.593e-17
P08061 No candidate annotation 288.5719 13.335e-11