SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 144 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30955 4,6,7-Trihydroxy-1,2,3,4-tetrahydroisoquinoline 181.0728 14.757e-14
P30962 Spongothymidine 258.0832 11.719e-11
P30963 No candidate annotation 372.7183 15.841e-14
P30983 No candidate annotation 557.1698 17.655e-12
P31011 Isochamaecynone 202.1347 18.131e-12
P31019 Blepharocalyxin D 592.2828 16.035e-12
P31108 No candidate annotation 369.7005 16.038e-13
P31113 No candidate annotation 182.1378 18.999e-12
P31114 No candidate annotation 336.6611 13.333e-11
P31132 Amritoside B 588.2399 13.064e-11