Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31011

Metabolite ID
P31011
Deionized mass
202.1347 Da
Average m/z
203.1422
Average RT
16.1953
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
86
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

86 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)9.361e-11
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.639e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.412e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.208e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.191e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)7.981e-12
Glyma.17G215200 hypothetical protein NA 2Chr17:36125880–36142936 (+)2.893e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)7.822e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.842e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)7.786e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)2.491e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.52e-12
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)5.678e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)5.678e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)5.678e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.231e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)8.817e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 1Chr04:8887523–8888545 (-)8.379e-11
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)8.379e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.131e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.171e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.616e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.616e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.227e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.652e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.652e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.652e-13
Glyma.05G147700 hypothetical protein NA 1Chr05:34199925–34202541 (+)5.889e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)6.001e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.117e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.586e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.414e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.441e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)7.366e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)7.366e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)7.367e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.986e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.11e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.11e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)9.361e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)9.361e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)7.489e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.208e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.208e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.208e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.208e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.822e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.886e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)3.021e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.344e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.344e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.37e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.578e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.578e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.578e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)6.612e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.474e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.228e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.228e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.228e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)8.442e-12
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)2.047e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)5.219e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.098e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.098e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.706e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)6.346e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.039e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.611e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.092e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.092e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)2.704e-13
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)2.893e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)2.893e-11
Glyma.17G213300 hypothetical protein NA 1Chr17:35589559–35592664 (+)2.893e-11
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 1Chr17:35740625–35746554 (-)2.893e-11
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 1Chr17:35767502–35768989 (-)2.893e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)2.893e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.893e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.412e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.23e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.23e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)5.083e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.296e-11
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)3.588e-11
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)6.619e-11