SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 140 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30089 Glycochenodeoxycholic acid 3-glucuronide 625.3451 16.959e-12
P30108 Kopsiflorine N(4)-oxide 428.1950 19.645e-11
P30142 Hippuryl-histidyl-leucine 429.2007 17.565e-12
P30152 7,7-O-Dihydroebuloside 446.2130 18.018e-11
P30154 Methyl syramuraldehydate 242.0766 11.696e-13
P30186 No candidate annotation 876.2712 16.548e-13
P30204 Theasaponin C1 1174.5741 16.016e-12
P30224 2alpha,3alpha,4beta,15,16-Pentahydroxy-ent-cleroda-13Z-ene 356.2536 16.826e-12
P30231 3-O-beta-d-glucopyranosyl-(1-2)-[beta-d-xylopyranosyl-(1-2)-beta-d-glucopyranosyl-(1-4)]-alpha-l-arabinopyranosyl-16alpha-acetoxy-3beta,22alpha,28-trihydroxyolean-12-ene 1104.5574 14.442e-11
P30232 Rhamnetin 3-O-rhamninoside 770.2272 13.432e-11