Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30224

Metabolite ID
P30224
Deionized mass
356.2536 Da
Average m/z
357.2601
Average RT
15.9764
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)9.671e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.015e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.383e-15
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.632e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.454e-14
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.346e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.91e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)9.868e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)5.051e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.228e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.228e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)5.307e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.668e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)4.402e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.826e-12
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)8.288e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.923e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.395e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)8.698e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)8.698e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)8.698e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.066e-13
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)6.115e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)9.326e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.6e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.299e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.285e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.966e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.83e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.866e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.866e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)6.428e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.354e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.354e-14
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.861e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.454e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.64e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.209e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)5.475e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)7.678e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.678e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.976e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.481e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.976e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.976e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.853e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.394e-11
Glyma.16G053400 hypothetical protein AT3G27000:ARP2:actin related protein 2 1Chr16:5187313–5196238 (-)4.976e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)5.16e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.118e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.35e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.542e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)6.806e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.015e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.226e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.226e-13
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)7.844e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.272e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.005e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.005e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.686e-12