Overview Annotation GWAS Evidence Associated genes

P30186

Metabolite ID
P30186
Deionized mass
876.2712 Da
Average m/z
877.2777
Average RT
15.9672
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.698e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.397e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)2.263e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.214e-11
Glyma.17G153900 hypothetical protein AT5G46580:AT5G46580:pentatricopeptide (PPR) repeat-containing protein 2Chr17:12919733–12922117 (-)3.443e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.153e-11
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 1Chr02:10910270–10917963 (-)3.473e-12
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 1Chr02:10933057–10936021 (-)3.473e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)1.14e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.313e-12
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)1.208e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.548e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.202e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.202e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.208e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.162e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.162e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.162e-13
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.366e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.964e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.639e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.221e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.69e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.69e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)6.095e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.809e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.205e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.657e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.205e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.205e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.657e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)2.592e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)2.592e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.304e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.428e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.287e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.287e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.287e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.287e-12
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK… 1Chr11:5795953–5801540 (+)5.236e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.676e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.676e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.225e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.31e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.224e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.224e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.387e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.107e-12
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)4.214e-12
Glyma.16G093700 hypothetical protein NA 1Chr16:15100987–15107038 (+)5.349e-11
Glyma.16G093800 hypothetical protein NA 1Chr16:15144247–15160454 (-)5.349e-11
Glyma.16G094200 hypothetical protein NA 1Chr16:15770075–15772475 (-)5.349e-11
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 1Chr16:15796268–15811033 (-)5.349e-11
Glyma.16G094500 hypothetical protein AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc 1Chr16:15914865–15930406 (-)5.349e-11
Glyma.16G095100 hypothetical protein AT1G32080:LrgB:uncharacterized protein 1Chr16:16891012–16896814 (-)5.349e-11
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 1Chr16:16911412–16924907 (-)5.349e-11
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 1Chr16:17694666–17720668 (+)5.349e-11
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 1Chr16:18621149–18647713 (-)5.349e-11
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 1Chr16:18767931–18777350 (-)5.349e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.397e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.136e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)9.92e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.698e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.699e-11
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 1Chr17:12986575–12990804 (-)3.483e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.893e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)5.901e-11