SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 119 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25818 Leucodelphinidin 3-O-(beta-D-glucopyranosyl-(1->4)-alpha-L-rhamnopyranoside) 630.1863 18.702e-12
P25844 N-Methyltetrahydrothalifendine-10-O-glucoside 501.2004 16.369e-12
P25858 Barasertib 587.1983 11.79e-11
P25958 Pestalotheol B 296.1612 17.674e-11
P26007 No candidate annotation 1050.3640 15.219e-11
P26023 No candidate annotation 926.2359 16.85e-12
P26030 Antibiotic 106B 425.1811 11.581e-12
P26076 Amopyroquine 353.1309 18.4e-17
P26089 Kni 102 595.2949 15.919e-11
P26091 Isorhamnetin 3-sophoroside-7-glucoside 802.2282 14.331e-12