Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26030

Metabolite ID
P26030
Deionized mass
425.1811 Da
Average m/z
426.1891
Average RT
14.8449
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.486e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.529e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)6.78e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)8.821e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.682e-11
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 1Chr05:31585853–31588967 (-)4.281e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.581e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)9.504e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.673e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.416e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.416e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.81e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.72e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.72e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.72e-14
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)1.675e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.158e-12
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.158e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.158e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.158e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.081e-20
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.428e-14
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)5.852e-11
Glyma.07G211600 hypothetical protein AT3G19190:ATG2:autophagy 2 1Chr07:38313562–38326234 (+)2.713e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.486e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.486e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.486e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.486e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.465e-14
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.785e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.194e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.194e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.896e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.108e-12
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 1Chr16:33322352–33330062 (+)1.897e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.234e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.003e-11