SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G124800

Description hypothetical protein

Gene interval Chr04:16368438–16390781 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features25Overlap
Maximum supporting SNP records9
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.6400.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

25 matching features · page 1 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24858 4,4'-Dihydroxystilbene 212.0820 91.45e-12
P04198 Arginylisoleucine 287.1955 71.598e-11
P05694 Simeconazole 293.1354 75.18e-11
P05790 No candidate annotation 384.9855 71.042e-11
P30443 Vaccihein A 378.0951 71.419e-11
P00487 Ethyl 2-amino-3-sulfanylpropanoate 149.0496 65.874e-11
P15222 1,4-Divinylbenzene 130.0774 34.267e-12
P26930 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0409 25.743e-12
P28937 Siccayne 174.0668 21.74e-11
P04006 Garcinia lactone dibutyl ester 302.1367 12.988e-11